Top 100 Gene ranking

Rank	Access	Id	Gene	Definition
1	115	nfa35380	rox	rifampin monooxygenase (low-level rifampin resistance _RESISTANCE; rifampin decoloration)
2	74	nfa15250		hypothetical protein (_PHAGE; putative intein at position 1682370..1683308 (found by Prof. S. Pietrokovski))
3	61	nfa5060		hypothetical protein
4	57	nfa7710		hypothetical protein (reductase?)
5	55	nfa50540	yrbE4A	YrbE family protein (_VIRULENCE)
6	54	nfa54150		hypothetical protein
7	54	nfa50530	yrbE4B	YrbE family protein (_VIRULENCE)
8	53	nfa50510	mce4B	Mce family protein (_VIRULENCE)
9	42	nfa9220		homoserine O-acetyltransferase
10	36	nfa9010		hypothetical protein
11	35	nfa14410	fadE17	acyl-CoA dehydrogenase (isobutylamine N-hydroxylase?)
12	35	nfa9320		guanyl-specific ribonuclease
13	34	nfa9080		hypothetical protein
14	34	nfa9230		isocitrate/isopropylmalate dehydrogenase
15	34	nfa9340		transcriptional regulator (TetR)
16	34	nfa14550		transcriptional regulator (TetR)
17	34	nfa14840		transcriptional regulator (_PHAGE)
18	34	nfa13910		transposase
19	34	nfa54830		lipase
20	34	nfa56640		N-acetylmuramoyl-L-alanine amidase (autolysin)
21	33	nfa6690		hypothetical protein (conservon)
22	33	nfa15170		transposase
23	33	nfa14350		hypothetical protein
24	33	nfa14130		transcriptional regulator
25	33	nfa13920		sigma factor (extracytoplasmic function)
26	33	nfa14480		hypothetical protein
27	32	nfa14520	recO	DNA repair protein
28	32	nfa9310		exonuclease
29	32	nfa14440		hypothetical protein
30	32	nfa14490		acyltransferase (macrolide O-acyltransferase?)
31	32	nfa14120		transporter (MFS)
32	32	nfa44380		transposase (frameshift)
33	32	nfa14210		oxygen-independent coproporphyrinogen III oxidase (hemN?)
34	32	nfa14060		sulfate ABC transporter permease
35	32	nfa14030		hypothetical protein
36	32	nfa14500		hydrolase
37	32	nfa55020		ABC transporter ATP-binding protein
38	32	nfa9210		hypothetical protein
39	32	nfa13940		hypothetical protein (similar to M. leprae lipoprotein LpK, which induces IL-12 in human monocytes; probably antigenic)
40	32	nfa14700	dnaG	DNA primase
41	32	nfa14600		transcriptional regulator
42	32	nfa45490	narG	nitrate reductase alpha subunit (_VIRULENCE suggested)
43	32	nfa14070		sulfate ABC transporter ATP-binding protein
44	32	nfa13960	rpsT	ribosomal protein S20
45	32	nfa15110		hypothetical protein (_PHAGE)
46	32	nfa56150		DNA polymerase IV family protein (DNA repair; dinP homolog)
47	32	nfa14720		DNA-binding protein (_PHAGE)
48	32	nfa55530		transcriptional regulator
49	31	nfa14460		oxidoreductase
50	31	nfa52270		hypothetical protein
51	31	nfa13870		hypothetical protein
52	31	nfa53970	fabH3	3-oxoacyl-ACP synthase (fabH family)
53	31	nfa14530		undecaprenyl pyrophosphate synthetase
54	31	nfa45600	nirD	nitrite reductase (NAD(P)H) subunit (_VIRULENCE)
55	31	nfa9130		short chain dehydrogenase
56	31	nfa45620	narK	nitrite transporter (MFS)
57	31	nfa35390		ABC transporter ATP-binding protein (similar to many resistance genes)
58	31	nfa13850		hypothetical protein
59	31	nfa8970	guaA	GMP synthase
60	31	nfa45520	narI	nitrate reductase gamma subunit (_VIRULENCE)
61	31	nfa9390		transporter (MFS)
62	31	nfa15420		hypothetical protein (_PHAGE)
63	31	nfa45510	narJ	nitrate reductase delta subunit (_VIRULENCE)
64	31	nfa43630		ABC transporter ATP-binding protein
65	31	nfa19310		monooxygenase
66	31	nfa14930		hypothetical protein (_PHAGE)
67	31	nfa15350		hypothetical protein (_PHAGE)
68	31	nfa14710		hypothetical protein
69	31	nfa14640		hypothetical protein
70	31	nfa9150	dnaE2	DNA polymerase III alpha subunit (Cell 113:183-193 (2003))
71	31	nfa23520		hypothetical protein (conservon)
72	31	nfa45500	narH	nitrate reductase beta subunit (_VIRULENCE)
73	31	nfa14340		transporter
74	31	nfa14180	cysH	phosphoadenosine phosphosulfate reductase
75	31	nfa14320		phosphate starvation-induced protein (phoH homolog)
76	30	nfa46210		hypothetical protein
77	30	nfa46260		hypothetical protein
78	30	nfa46160		rubredoxin
79	30	nfa43780		hypothetical protein
80	30	nfa45270		hypothetical protein
81	30	nfa14560		hypothetical protein
82	30	nfa52550		branched-chain amino acid transporter
83	30	nfa14420		hypothetical protein
84	30	nfa14200		hypothetical protein
85	30	nfa14040		transporter
86	30	nfa45640		transcriptional regulator
87	30	nfa14290		hypothetical protein
88	30	nfa46410		cytochrome P450 monooxygenase
89	30	nfa46430		hypothetical protein
90	30	nfa53110		cytochrome P450 monooxygenase (CYP154; F92A mutation results in altered regioselectivity (Bracco et al. PMID:24134652, PMID:25372679, PMID:33145893))
91	30	nfa43420		hypothetical protein
92	30	nfa13990	lepA	GTP-binding elongation factor
93	30	nfa26110		hypothetical protein
94	30	nfa46280		transporter
95	30	nfa14300		transporter (MFS)
96	30	nfa45440		initiation factor eIF-2B alpha subunit homolog (eukaryotic)
97	30	nfa14250		transcriptional repressor (for heat shock genes)
98	30	nfa14310		transcriptional regulator
99	30	nfa44800	smpB	small protein B (tmRNA-binding protein)
100	30	nfa13840		acetyltransferase (GNAT)