Inverted Repeats Finder Program written by:
Gary Benson
Department of Biomathematical Sciences
Mount Sinai School of Medicine
Version 3.05
Sequence: pNF1 2003-09-03
Parameters: 2 3 5 80 10 40 100000 500000 -t7 600000 -d
Length: 184026
Tables: 1
This is table 1 of 1 ( 5 repeats found )
Click on indices to view alignment
Table Explanation
| Left Indices | Length | Right Indices | Length | Loop | Percent
Matches | Percent
Indels | Score | Percent
A/T | Percent
G/C | Percent
A-T pairs | Percent
G-C pairs | Percent
G-T pairs | Center times 2 | Average Center times 2 |
| 1869--1888 | 20 | 1948--1967 | 20 | 59 | 100.00 | 0.00 | 40 | 40.00 | 60.00 | 40.00 | 60.00 | 0.00 | 3836 | 3836 |
| 1948--1967 | 20 | 2015--2034 | 20 | 47 | 100.00 | 0.00 | 40 | 40.00 | 60.00 | 40.00 | 60.00 | 0.00 | 3982 | 3982 |
| 1869--1888 | 20 | 2015--2034 | 20 | 126 | 100.00 | 0.00 | 40 | 40.00 | 60.00 | 40.00 | 60.00 | 0.00 | 3903 | 3903 |
| 8441--8460 | 20 | 8468--8487 | 20 | 7 | 100.00 | 0.00 | 40 | 20.00 | 80.00 | 20.00 | 80.00 | 0.00 | 16928 | 16928 |
| 41192--41466 | 275 | 97444--97718 | 275 | 55977 | 71.38 | 5.65 | 129 | 31.09 | 68.91 | 29.21 | 70.79 | 0.00 | 138910 | 138910 |
Tables: 1
The End!