Tandem Repeats Finder Program written by:
Gary Benson
Department of Biomathematical Sciences
Mount Sinai School of Medicine
Version 4.00
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: NFA 2003-09-04 Parameters: 2 7 7 80 10 50 500 Length: 6021225

Tables:   1   2   3   4   5   6   7   

This is table  4  of  7  ( 836 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1929609--1929680
15
4.9
14
81
6
63
8
38
36
16
1.79
1929606--1929680
30
2.5
30
84
0
96
8
38
37
16
1.78
1935738--1935787
18
2.8
18
87
0
73
4
34
42
20
1.70
1948306--1948352
15
3.1
15
90
0
76
8
19
57
14
1.63
1949713--1949742
15
2.0
15
93
0
51
6
40
23
30
1.80
1967412--1967460
15
3.3
15
83
11
64
26
20
32
20
1.97
1972636--1972660
9
2.8
9
100
0
50
0
44
56
0
0.99
1987929--1987963
13
2.7
13
86
0
52
22
31
40
5
1.78
2023273--2023547
77
3.6
77
94
1
471
5
36
39
18
1.73
2034879--2034913
18
1.9
18
88
0
52
11
60
14
14
1.60
2035048--2035112
15
4.3
15
77
14
71
15
46
27
10
1.79
2035426--2035512
45
1.9
45
90
0
138
22
36
33
6
1.81
2035432--2035512
21
3.7
21
72
18
67
22
37
33
7
1.82
2035441--2035512
24
3.1
24
67
25
64
23
36
33
6
1.82
2035517--2035558
15
2.8
15
96
0
75
19
45
28
7
1.76
2035549--2035578
15
2.0
15
93
0
51
13
43
33
10
1.77
2046193--2046270
27
2.9
28
85
11
92
8
33
57
0
1.30
2049512--2049551
12
2.9
14
85
14
57
10
30
37
22
1.87
2054220--2054282
17
3.6
17
89
4
99
15
22
52
9
1.72
2059479--2059512
16
2.1
16
94
0
59
5
23
55
14
1.61
2085504--2085547
21
2.0
23
86
8
65
9
45
36
9
1.68
2090321--2090372
15
3.5
15
89
0
86
25
26
48
0
1.52
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2094833--2094892
27
2.2
28
82
8
79
6
36
46
10
1.64
2096110--2096138
15
1.9
15
100
0
58
13
44
41
0
1.44
2148219--2148257
21
1.9
20
89
5
60
20
33
41
5
1.74
2149769--2149801
13
2.5
13
95
0
57
18
15
51
15
1.77
2161016--2161053
16
2.4
16
86
8
51
23
15
21
39
1.92
2161704--2161743
20
2.0
20
85
0
53
5
50
40
5
1.46
2169270--2169318
15
2.9
18
73
17
59
12
32
46
8
1.71
2186196--2186223
12
2.3
12
100
0
56
14
35
42
7
1.73
2231894--2231953
30
2.0
29
84
12
77
10
33
45
11
1.74
2276698--2276737
18
2.2
18
86
8
55
7
27
47
17
1.74
2288894--2288926
17
2.0
17
88
5
50
21
12
57
9
1.62
2291897--2291930
10
3.3
10
84
8
50
8
32
58
0
1.29
2298590--2298647
24
2.4
24
79
0
71
8
18
48
24
1.76
2304145--2304176
16
2.0
16
100
0
64
18
25
37
18
1.94
2304147--2304184
16
2.4
16
90
0
58
21
26
31
21
1.98
2304186--2304220
14
2.5
14
100
0
70
8
31
34
25
1.86
2304181--2304240
14
4.1
14
86
4
57
11
31
35
21
1.90
2362373--2362403
15
2.1
15
100
0
62
0
22
51
25
1.48
2397607--2397633
14
1.9
14
100
0
54
14
44
33
7
1.73
2399129--2399158
9
3.3
9
95
0
51
0
20
46
33
1.51
2433644--2433678
18
1.9
18
88
0
52
17
42
40
0
1.49
2445953--2445994
21
2.0
20
86
4
57
7
61
26
4
1.42
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2459278--2459306
12
2.5
12
94
5
51
13
55
24
6
1.63
2463371--2463443
15
4.7
15
79
5
83
13
39
27
19
1.89
2486706--2486735
15
1.9
16
93
6
53
6
53
40
0
1.27
2504290--2504340
19
2.7
19
96
3
95
3
13
54
27
1.56
2515076--2515115
15
2.7
14
81
11
53
20
30
37
12
1.89
2515276--2515313
15
2.5
15
91
0
67
15
31
36
15
1.90
2527919--2527968
16
3.0
17
94
5
93
12
18
52
18
1.75
2562940--2562968
14
2.0
15
93
6
51
10
34
34
20
1.87
2587696--2587747
15
3.5
15
86
0
77
23
38
23
15
1.92
2602513--2602547
18
1.9
18
88
0
52
14
45
31
8
1.75
2604398--2604423
13
2.0
13
100
0
52
7
53
30
7
1.57
2615994--2616038
23
2.0
23
82
8
56
15
37
35
11
1.83
2629998--2630039
18
2.2
19
83
8
50
9
30
47
11
1.72
2632885--2632911
14
1.9
14
100
0
54
0
44
55
0
0.99
2682613--2682653
21
2.0
20
90
4
64
17
34
39
9
1.82
2692800--2692839
21
1.9
21
84
0
53
22
32
40
5
1.76
2703213--2703255
21
2.0
21
86
0
59
23
51
16
9
1.73
2709868--2709907
20
2.1
19
85
4
53
2
52
42
2
1.28
2743238--2743284
24
2.0
24
82
0
58
4
27
38
29
1.76
2746673--2746707
15
2.2
16
90
5
54
2
51
40
5
1.40
2758242--2758279
18
2.2
17
90
4
58
5
42
39
13
1.66
2786297--2786538
78
3.1
78
98
0
459
12
33
45
9
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2789831--2789865
14
2.5
14
100
0
70
14
37
40
8
1.76
2799406--2799446
21
1.9
22
85
5
57
12
31
56
0
1.36
2799699--2799739
21
1.9
22
85
5
57
17
41
36
4
1.71
2799920--2799967
21
2.3
21
82
13
55
12
52
33
2
1.51
2802390--2802428
18
2.1
18
80
9
51
0
28
48
23
1.51
2807286--2807360
15
5.0
15
88
0
114
16
32
40
12
1.84
2821079--2821125
24
1.9
25
82
4
60
17
44
34
4
1.68
2850319--2850352
17
1.9
17
88
5
50
2
23
41
32
1.69
2878169--2878244
27
2.8
27
95
2
134
9
17
56
17
1.65
2878612--2878653
15
2.8
16
82
10
61
14
33
42
9
1.78
2880033--2880087
24
2.3
24
81
6
67
7
34
47
10
1.66
2891806--2891892
18
4.8
18
80
5
86
3
49
24
22
1.65
2891806--2891892
36
2.4
36
84
3
104
3
49
24
22
1.65
2891826--2891917
18
5.1
18
80
7
71
3
46
27
22
1.67
2891867--2891919
18
2.9
18
88
5
72
1
41
32
24
1.66
2933903--2933958
28
2.0
27
82
3
67
10
35
44
8
1.71
2948098--2948151
18
3.0
18
86
0
81
0
29
33
37
1.58
2954458--2954492
18
2.1
16
89
10
52
5
42
42
8
1.59
2954481--2954540
27
2.2
27
85
11
79
8
43
40
8
1.65
2960227--2960266
21
1.9
21
85
10
55
7
37
45
10
1.66
2971218--2971251
15
2.3
15
90
5
52
17
32
32
17
1.94
2994709--2994757
17
2.6
20
75
18
59
8
34
57
0
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2994716--2994754
17
2.3
17
90
0
60
10
33
56
0
1.33
3029120--3029162
22
2.0
22
90
0
68
18
32
32
16
1.93
3035764--3035797
16
2.1
16
94
0
59
20
41
23
14
1.89
3038713--3038759
18
2.6
19
76
10
53
0
27
59
12
1.34
3080781--3080815
17
2.1
17
94
0
61
34
20
37
8
1.83
3085872--3085912
15
2.7
15
88
0
55
12
26
43
17
1.84
3086011--3086053
21
2.0
21
82
8
52
11
44
25
18
1.84
3098221--3098265
15
3.1
14
87
6
54
6
31
40
22
1.80
3109657--3109694
19
2.1
19
85
5
51
5
47
42
5
1.48
3110776--3110806
15
2.1
15
93
0
53
25
45
19
9
1.81
3152401--3152435
18
1.9
18
88
0
52
34
34
31
0
1.58
3155000--3155212
63
3.4
63
81
0
255
8
42
37
11
1.72
3155897--3155949
21
2.5
21
87
6
72
16
39
35
7
1.78
3183959--3184238
75
3.7
75
99
0
542
12
46
30
10
1.76
3218220--3218267
24
2.0
24
87
0
69
16
41
25
16
1.89
3270530--3270580
12
4.2
12
76
20
52
19
39
39
1
1.63
3290335--3290377
21
2.0
22
82
13
54
9
46
30
13
1.75
3295107--3295150
22
2.0
21
83
12
54
4
52
31
11
1.57
3296080--3296136
18
3.2
18
78
9
71
15
33
33
17
1.92
3312924--3313349
27
15.6
27
82
5
392
7
46
34
11
1.69
3313433--3313474
15
2.8
15
85
0
66
0
33
50
16
1.46
3316081--3316117
15
2.5
15
87
12
51
0
35
54
10
1.36
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3321680--3321739
15
4.0
15
75
16
52
8
53
35
3
1.48
3325005--3325029
12
2.1
12
100
0
50
16
44
40
0
1.47
3342430--3342472
21
2.0
22
86
4
61
0
55
32
11
1.36
3354240--3354279
15
2.6
15
84
4
53
15
50
25
10
1.74
3355653--3355732
30
2.9
26
78
12
88
5
47
33
13
1.65
3355756--3355854
33
3.1
32
77
16
107
5
40
36
18
1.72
3356899--3356927
14
2.0
15
93
6
51
0
51
34
13
1.42
3375603--3375636
15
2.3
15
94
0
59
14
52
32
0
1.42
3376959--3376985
10
2.7
10
100
0
54
0
18
33
48
1.49
3386820--3386859
18
2.3
18
86
4
55
0
25
50
25
1.50

Tables:   1   2   3   4   5   6   7