Tandem Repeats Finder Program written by:
Gary Benson
Department of Biomathematical Sciences
Mount Sinai School of Medicine
Version 4.00
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: NFA 2003-09-04 Parameters: 2 7 7 80 10 50 500 Length: 6021225

Tables:   1   2   3   4   5   6   7   

This is table  5  of  7  ( 836 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3427611--3427658
20
2.3
21
86
10
64
10
47
41
0
1.37
3428594--3428767
76
2.3
76
91
2
287
8
42
33
15
1.77
3433256--3433291
18
2.0
18
100
0
72
11
27
33
27
1.91
3444995--3445025
16
1.9
16
100
0
62
35
38
25
0
1.56
3481054--3481087
15
2.2
16
89
5
52
8
52
35
2
1.47
3626608--3626636
12
2.4
12
100
0
58
24
41
17
17
1.90
3630671--3630703
15
2.2
15
89
10
50
12
45
33
9
1.73
3634138--3634167
15
2.0
15
93
0
51
6
56
36
0
1.26
3653454--3653479
11
2.4
11
100
0
52
19
34
26
19
1.95
3677222--3677270
22
2.2
23
82
17
68
10
46
38
4
1.57
3682676--3682711
15
2.4
15
95
0
63
13
41
22
22
1.89
3684840--3684885
22
2.1
21
84
15
58
4
41
50
4
1.42
3689229--3689286
15
3.9
15
93
0
98
8
44
31
15
1.76
3691046--3691091
15
3.1
14
84
12
56
0
34
60
4
1.16
3697833--3697877
21
2.1
21
84
8
56
2
40
40
17
1.62
3700082--3700141
16
3.7
17
78
14
65
21
36
30
11
1.89
3703032--3703122
24
3.7
24
72
12
69
31
30
37
0
1.58
3703107--3703131
12
2.1
12
100
0
50
40
20
40
0
1.52
3703079--3703134
27
2.1
27
86
6
78
33
26
39
0
1.57
3726337--3726422
15
5.6
15
80
5
66
19
32
25
22
1.97
3726337--3726422
31
2.8
31
82
3
93
19
32
25
22
1.97
3734906--3734946
21
1.9
22
85
5
57
12
53
29
4
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3739647--3739676
12
2.5
12
100
0
60
10
46
36
6
1.64
3747180--3747211
15
2.1
15
100
0
64
25
46
21
6
1.74
3794924--3794950
9
3.0
9
100
0
54
33
44
22
0
1.53
3797193--3797235
16
2.7
16
100
0
86
32
32
34
0
1.58
3848286--3848314
15
1.9
15
100
0
58
0
51
41
6
1.28
3866289--3866321
16
2.2
16
89
10
52
15
60
24
0
1.35
3871646--3871680
15
2.3
15
90
0
52
14
28
57
0
1.38
3876460--3876506
24
2.0
24
83
8
60
12
34
38
14
1.85
3879440--3879495
25
2.4
23
85
8
69
17
44
26
10
1.82
3881854--3881889
15
2.4
15
95
0
63
25
63
11
0
1.27
3910836--3910882
15
3.1
15
79
11
51
0
27
65
6
1.16
3914917--3914950
15
2.3
15
95
5
61
0
47
35
17
1.48
3917423--3917596
78
2.2
78
96
0
321
10
41
31
17
1.83
3926486--3926520
18
1.9
18
88
0
52
11
40
37
11
1.77
3933565--3933676
27
4.1
27
95
1
197
21
36
27
14
1.92
3937712--3937889
24
7.4
23
65
24
91
24
46
25
3
1.70
3937646--3937918
48
5.7
48
89
2
336
24
43
27
4
1.73
3938583--3938621
21
1.9
20
84
5
51
28
38
33
0
1.57
3942065--3942089
12
2.1
12
100
0
50
28
40
32
0
1.57
3953836--3953864
15
1.9
15
100
0
58
13
31
34
20
1.92
3971216--3971250
18
1.9
18
100
0
70
17
40
37
5
1.73
3971781--3971839
15
3.9
15
95
0
91
6
25
33
33
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3975679--3975711
15
2.1
16
88
5
50
15
51
27
6
1.66
3976649--3976752
15
7.0
14
77
11
100
30
35
32
0
1.65
3976651--3976752
30
3.4
29
82
6
116
31
34
33
0
1.65
3976649--3976752
45
2.3
45
88
3
147
30
35
32
0
1.65
3993745--3993780
19
1.9
19
94
5
65
5
38
33
22
1.77
4002079--4002119
21
1.9
22
85
5
57
14
39
41
4
1.67
4021541--4021618
23
3.4
23
100
0
156
11
39
39
8
1.73
4034452--4034497
23
2.0
23
83
12
58
4
36
36
21
1.74
4042155--4042216
16
3.9
16
86
0
79
9
22
53
14
1.70
4049985--4050015
15
2.1
15
93
0
53
9
45
25
19
1.81
4070025--4070073
15
3.2
15
88
2
62
8
42
28
20
1.80
4070032--4070076
15
2.9
15
90
3
63
6
42
28
22
1.79
4081804--4081833
13
2.3
13
94
0
51
10
50
40
0
1.36
4081886--4081915
15
2.0
15
93
0
51
6
56
23
13
1.60
4082421--4082464
21
2.1
21
91
8
72
18
25
52
4
1.64
4084412--4084460
12
4.2
12
84
2
64
0
34
51
14
1.43
4087339--4087515
77
2.3
78
90
2
268
11
45
29
12
1.78
4091418--4091467
24
2.1
24
85
3
66
10
24
28
38
1.87
4091428--4091472
24
1.9
24
90
4
74
8
22
33
35
1.85
4159763--4159803
15
2.7
15
88
11
57
0
9
48
41
1.36
4178797--4178836
19
2.1
19
100
0
80
10
25
40
25
1.86
4216167--4216226
27
2.2
27
82
5
68
6
36
46
10
1.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4216281--4216346
27
2.4
27
90
9
100
9
39
48
3
1.50
4216281--4216361
27
3.0
26
76
7
74
7
40
49
2
1.44
4225411--4225691
83
3.4
83
96
0
510
14
38
38
7
1.76
4229844--4229879
18
2.0
18
100
0
72
27
16
38
16
1.90
4233609--4233881
78
3.5
78
96
0
501
9
37
34
18
1.84
4236535--4236567
9
3.7
9
95
0
57
15
33
42
9
1.78
4245192--4245221
14
2.1
14
100
0
60
20
26
13
40
1.89
4255571--4255601
16
2.0
16
93
6
55
12
32
48
6
1.67
4261719--4261755
18
2.1
18
94
0
65
24
54
21
0
1.45
4271292--4271325
15
2.3
15
94
0
59
5
58
8
26
1.51
4271321--4271354
15
2.3
15
100
0
68
0
44
26
29
1.55
4281306--4281341
18
2.0
18
100
0
72
33
44
22
0
1.53
4281305--4281348
18
2.6
17
86
13
65
31
40
27
0
1.56
4288134--4288175
15
2.8
15
96
0
75
7
61
23
7
1.47
4288164--4288206
18
2.4
18
84
0
50
4
62
20
11
1.46
4288195--4288307
18
6.2
18
97
1
208
4
60
18
16
1.52
4288493--4288532
21
1.9
21
84
0
53
7
52
27
12
1.66
4288415--4288632
114
1.9
114
83
3
287
10
47
27
14
1.76
4301345--4301380
18
2.0
18
88
0
54
16
41
25
16
1.89
4306752--4306797
12
4.0
12
75
18
53
8
41
39
10
1.71
4306754--4306797
21
2.1
21
91
0
70
9
40
38
11
1.73
4306760--4306804
21
2.1
21
87
0
63
11
40
37
11
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4306837--4306864
9
3.1
9
100
0
56
0
42
14
42
1.45
4314268--4314334
15
4.5
15
90
0
98
2
19
56
20
1.55
4316969--4317008
21
1.9
21
85
10
55
7
32
40
20
1.80
4317931--4317981
24
2.1
24
82
7
59
5
52
23
17
1.66
4321011--4321069
30
2.0
30
82
0
73
23
23
25
27
2.00
4327653--4327706
27
2.0
26
86
10
74
11
44
37
7
1.68
4337390--4337433
18
2.4
18
78
14
54
6
40
38
13
1.71
4354347--4354392
15
2.8
17
74
12
51
0
56
39
4
1.19
4360666--4360718
15
3.3
15
76
19
54
0
33
33
32
1.58
4360664--4360732
18
4.0
18
75
17
74
0
30
37
31
1.58
4360710--4360752
21
2.0
21
95
0
77
0
20
46
32
1.51
4360752--4360794
15
2.9
15
92
0
68
6
34
37
20
1.80
4360919--4360950
15
2.1
15
100
0
64
0
25
43
31
1.55
4360880--4360981
36
2.9
36
81
4
111
0
29
39
31
1.57
4360956--4360985
15
2.0
15
100
0
60
0
40
26
33
1.57
4373393--4373433
20
2.0
21
95
4
75
39
31
24
4
1.76
4373452--4373517
15
4.1
15
74
14
69
16
36
24
22
1.94
4373458--4373494
19
1.9
19
100
0
74
16
40
21
21
1.91
4381819--4381859
15
2.4
18
73
23
52
21
39
39
0
1.54
4381827--4381858
15
2.1
15
94
0
55
18
37
43
0
1.51
4401286--4401320
18
1.9
18
100
0
70
5
31
51
11
1.61
4404083--4404186
24
4.3
24
68
4
66
12
33
45
8
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4404243--4404441
24
8.3
24
76
2
148
21
37
37
4
1.74
4404252--4404438
72
2.6
72
81
6
200
20
36
37
4
1.74
4404243--4404441
48
4.1
48
77
6
179
21
37
37
4
1.74
4405646--4405683
20
1.9
20
84
10
51
7
31
50
10
1.66
4407385--4407421
18
2.1
18
100
0
74
10
40
43
5
1.63
4413495--4413559
22
3.0
22
90
4
105
18
53
21
6
1.66
4413479--4413576
44
2.2
44
81
3
126
17
52
22
8
1.71
4414409--4414473
16
4.1
16
85
0
85
16
27
40
15
1.89
4414406--4414471
32
2.1
32
88
0
96
16
27
39
16
1.90
4452103--4452136
15
2.3
15
94
0
59
17
35
47
0
1.48

Tables:   1   2   3   4   5   6   7